AI-ACCELERATED DRUG DISCOVERY

Sphingosine 1-phosphate receptor 5

Explore its Potential with AI-Driven Innovation
Predicted by Alphafold

Sphingosine 1-phosphate receptor 5 - Focused Library Design

Available from Reaxense

This protein is integrated into the Receptor.AI ecosystem as a prospective target with high therapeutic potential. We performed a comprehensive characterization of Sphingosine 1-phosphate receptor 5 including:

1. LLM-powered literature research

Our custom-tailored LLM extracted and formalized all relevant information about the protein from a large set of structured and unstructured data sources and stored it in the form of a Knowledge Graph. This comprehensive analysis allowed us to gain insight into Sphingosine 1-phosphate receptor 5 therapeutic significance, existing small molecule ligands, relevant off-targets, and protein-protein interactions.

 Fig. 1. Preliminary target research workflow

2. AI-Driven Conformational Ensemble Generation

Starting from the initial protein structure, we employed advanced AI algorithms to predict alternative functional states of Sphingosine 1-phosphate receptor 5, including large-scale conformational changes along "soft" collective coordinates. Through molecular simulations with AI-enhanced sampling and trajectory clustering, we explored the broad conformational space of the protein and identified its representative structures. Utilizing diffusion-based AI models and active learning AutoML, we generated a statistically robust ensemble of equilibrium protein conformations that capture the receptor's full dynamic behavior, providing a robust foundation for accurate structure-based drug design.

 Fig. 2. AI-powered molecular dynamics simulations workflow

3. Binding pockets identification and characterization

We employed the AI-based pocket prediction module to discover orthosteric, allosteric, hidden, and cryptic binding pockets on the protein’s surface. Our technique integrates the LLM-driven literature search and structure-aware ensemble-based pocket detection algorithm that utilizes previously established protein dynamics. Tentative pockets are then subject to AI scoring and ranking with simultaneous detection of false positives. In the final step, the AI model assesses the druggability of each pocket enabling a comprehensive selection of the most promising pockets for further targeting.

 Fig. 3. AI-based binding pocket detection workflow

4. AI-Powered Virtual Screening

Our ecosystem is equipped to perform AI-driven virtual screening on Sphingosine 1-phosphate receptor 5. With access to a vast chemical space and cutting-edge AI docking algorithms, we can rapidly and reliably predict the most promising, novel, diverse, potent, and safe small molecule ligands of Sphingosine 1-phosphate receptor 5. This approach allows us to achieve an excellent hit rate and to identify compounds ready for advanced lead discovery and optimization.

 Fig. 4. The screening workflow of Receptor.AI

Receptor.AI, in partnership with Reaxense, developed a next-generation technology for on-demand focused library design to enable extensive target exploration.

The focused library for Sphingosine 1-phosphate receptor 5 includes a list of the most effective modulators, each annotated with 38 ADME-Tox and 32 physicochemical and drug-likeness parameters. Furthermore, each compound is shown with its optimal docking poses, affinity scores, and activity scores, offering a detailed summary.

Sphingosine 1-phosphate receptor 5

partner:

Reaxense

upacc:

Q9H228

UPID:

S1PR5_HUMAN

Alternative names:

Endothelial differentiation G-protein-coupled receptor 8; Sphingosine 1-phosphate receptor Edg-8

Alternative UPACC:

Q9H228; Q6NW11

Background:

Sphingosine 1-phosphate receptor 5 (S1P5), also known as Endothelial differentiation G-protein-coupled receptor 8 and Sphingosine 1-phosphate receptor Edg-8, plays a pivotal role in cellular processes. It acts as a receptor for sphingosine 1-phosphate (S1P), a lysosphingolipid that influences various physiological effects across cell types and tissues. S1P5 is intricately linked to G(i/0)alpha and G(12) subclass of heteromeric G-proteins, suggesting its broad regulatory functions, including the transformation of radial glial cells into astrocytes and modulation of their proliferative activity.

Therapeutic significance:

Understanding the role of Sphingosine 1-phosphate receptor 5 could open doors to potential therapeutic strategies.

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